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Diffstat (limited to 'cad/plugins/DNA/B-DNA/PAM3-bases/README')
| -rw-r--r-- | cad/plugins/DNA/B-DNA/PAM3-bases/README | 18 |
1 files changed, 18 insertions, 0 deletions
diff --git a/cad/plugins/DNA/B-DNA/PAM3-bases/README b/cad/plugins/DNA/B-DNA/PAM3-bases/README new file mode 100644 index 000000000..f91d6b6e4 --- /dev/null +++ b/cad/plugins/DNA/B-DNA/PAM3-bases/README @@ -0,0 +1,18 @@ +$Id: $
+
+Copyright 2006-2007 Nanorex, Inc. See LICENSE file for details.
+
+These files are used by Dna.py to create PAM3 DNA structures in the
+CAD program:
+
+- StartBasePair.mmp
+- MiddleBasePair.mmp
+- EndBasePair.mmp
+- SingleBasePair.mmp
+
+Each file contains two "Ss3" (Sugar) pseudo atoms named "a" and "b" (via the
+new Atom "dnaBaseName" info records) which get assigned their permanent
+base letters when the DNA structure is generated (see Dna.make()).
+The "a" atom belongs to "Strand1" and atom "b" (the complement of "a") belongs
+to "Strand2".
+
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